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    small acidic-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821238, updated on 18-Sep-2024

    Summary

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    Official Full Name
    small acidic-like protein
    Primary source
    TAIR:AT3G02220
    Locus tag
    AT3G02220
    See related
    Araport:AT3G02220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14P3.13; F14P3_13
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (412041..413742, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L39 family protein Neighboring gene Proteasome component (PCI) domain protein Neighboring gene COBRA-like protein 1 precursor Neighboring gene reversibly glycosylated polypeptide 1 Neighboring gene root meristem growth factor-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_111089.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    small acidic-like protein
    NP_186871.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      412041..413742 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111089.4 → NP_186871.1  small acidic-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186871.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VB99, A0A5S9X8D0, Q9SRT8
      Conserved Domains (1) summary
      pfam10217
      Location:9 → 100
      DUF2039; Uncharacterized conserved protein (DUF2039)
    Nucleotide Protein
    Heading Accession and Version

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