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    EMB2786 COMPLEX 1 LYR-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820993, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EMB2786
    Official Full Name
    COMPLEX 1 LYR-like protein
    Primary source
    TAIR:AT3G17300
    Locus tag
    AT3G17300
    See related
    Araport:AT3G17300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    At3g17300
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    Genomic context

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    See EMB2786 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (5907212..5909003)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene pseudo Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene evolutionarily conserved C-terminal region 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001338281.1
    NM_001338282.1
    NM_112608.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    COMPLEX 1 LYR-like protein
    NP_001319576.1
    • unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_566572.1
    • unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5907212..5909003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112608.4 → NP_566572.1  COMPLEX 1 LYR-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566572.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHS5, A0A384L5T1, Q93XW8, Q9LUU1
      Conserved Domains (1) summary
      cd20251
      Location:16 → 73
      Complex1_LYR_SF; LYR (leucine-tyrosine-arginine) motif found in Complex1_LYR-like superfamily

    2. NM_001338282.1 → NP_001327125.1  COMPLEX 1 LYR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHS5, A0A384L5T1, Q93XW8, Q9LUU1
      Conserved Domains (1) summary
      cd20251
      Location:16 → 73
      Complex1_LYR_SF; LYR (leucine-tyrosine-arginine) motif found in Complex1_LYR-like superfamily

    3. NM_001338281.1 → NP_001319576.1  COMPLEX 1 LYR-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MSC1
      Conserved Domains (1) summary
      pfam05347
      Location:27 → 54
      Complex1_LYR; Complex 1 protein (LYR family)
    Nucleotide Protein
    Heading Accession and Version

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