EXPA5 expansin A5 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: EXPA5
Official Full Name: expansin A5
Primary source: TAIR:AT3G29030
Locus tag: AT3G29030
See related: Araport:AT3G29030
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ARABIDOPSIS THALIANA EXPANSIN 5; ARABIDOPSIS THALIANA EXPANSIN A5; ATEXP5; ATEXPA5; ATHEXP ALPHA 1.4; EXP5; EXPANSIN 5; expansin A5
Summary: Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
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Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Ethylene reduced AtEXPA5 expression levels in Arabidopsis.
Title: Ethylene negatively regulates EXPA5 expression in Arabidopsis thaliana.
spatial and temporal roles of EXPANSIN A5 (AtEXPA5) in growth and development of Arabidopsis thaliana
Title: Brassinosteroids control AtEXPA5 gene expression in Arabidopsis thaliana.

Submit: New GeneRIF Correction

NM_113824.3

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within plant-type cell wall loosening	NAS Non-traceable Author Statement more info	PubMed
involved_in plant-type cell wall organization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within primary root development	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within unidimensional cell growth	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within unidimensional cell growth	NAS Non-traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	ISM Inferred from Sequence Model more info

NP_189545.1

expansin A5 (EXPA5); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 2184 Blast hits to 2181 proteins in 162 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 43; Plants - 2080; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).