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    MTM1 manganese tracking factor for mitochondrial SOD2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828907, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MTM1
    Official Full Name
    manganese tracking factor for mitochondrial SOD2
    Primary source
    TAIR:AT4G27940
    Locus tag
    AT4G27940
    See related
    Araport:AT4G27940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2; ATMTM1; manganese tracking factor for mitochondrial SOD2; T13J8.50; T13J8_50
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    Genomic context

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    See MTM1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (13904265..13907405)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SET domain protein 16 Neighboring gene PYR1-like 10 Neighboring gene ncRNA Neighboring gene cytokinin response factor 4 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Significance of AtMTM1 and AtMTM2 for Mitochondrial MnSOD Activation in Arabidopsis. Hu SH, et al. Front Plant Sci, 2021. PMID 34434202, Free PMC Article
    2. Subcellular localizations of Arabidopsis myotubularins MTM1 and MTM2 suggest possible functions in vesicular trafficking between ER and cis-Golgi. Nagpal A, et al. J Plant Physiol, 2016 Aug 1. PMID 27340857
    3. AtMTM1, a novel mitochondrial protein, may be involved in activation of the manganese-containing superoxide dismutase in Arabidopsis. Su Z, et al. Planta, 2007 Sep. PMID 17522887
    4. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis myotubularins play a role in the vesicular trafficking between endoplasmic reticulum exit sites and cis-Golgi elements.
      Title: Subcellular localizations of Arabidopsis myotubularins MTM1 and MTM2 suggest possible functions in vesicular trafficking between ER and cis-Golgi.
    2. MTM1(At4g27940)encodes a mitochondrial protein that may be playing an important role in activation of MnSOD1 [MTM1]
      Title: AtMTM1, a novel mitochondrial protein, may be involved in activation of the manganese-containing superoxide dismutase in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_118932.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables metallochaperone activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables superoxide dismutase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to paraquat IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in stress response to metal ion IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    manganese tracking factor for mitochondrial SOD2
    NP_567790.1
    • manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13904265..13907405
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118932.5 → NP_567790.1  manganese tracking factor for mitochondrial SOD2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567790.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q944H5, Q9SUE4
      UniProtKB/TrEMBL
      A0A178V3U9, A0A5S9XWI2
      Conserved Domains (1) summary
      pfam00153
      Location:320 → 410
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q944H5.1

    Gene LinkOut

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