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    Leucine-rich repeat (LRR) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836823, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Leucine-rich repeat (LRR) family protein
    Primary source
    TAIR:AT5G66890
    Locus tag
    AT5G66890
    See related
    Araport:AT5G66890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUD21.15; MUD21_15
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (26712944..26714472, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ASYMMETRIC LEAVES 2-like 1 Neighboring gene sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 Neighboring gene ncRNA Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene Disease resistance protein (CC-NBS-LRR class) family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The N-terminally truncated helper NLR NRG1C antagonizes immunity mediated by its full-length neighbors NRG1A and NRG1B. Wu Z, et al. Plant Cell, 2022 Apr 26. PMID 34871452, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_126088.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within defense response to other organism IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Leucine-rich repeat (LRR) family protein
    NP_201490.1
    • Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G66900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26712944..26714472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126088.2 → NP_201490.1  Leucine-rich repeat (LRR) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201490.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FKZ2
      UniProtKB/TrEMBL
      A0A5S9YJQ0, A0A7G2FM93
      Conserved Domains (2) summary
      PLN03210
      Location:304 → 378
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00034
      Location:204 → 229
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FKZ2.1

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