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    Tryptophan/tyrosine permease [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832070, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Tryptophan/tyrosine permease
    Primary source
    TAIR:AT5G19500
    Locus tag
    AT5G19500
    See related
    Araport:AT5G19500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20D1.20; T20D1_20
    Summary
    Encodes a putative amino acid transporter that localizes to the chloroplast inner envelope membrane.
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (6578890..6581945)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit Neighboring gene transferases/nucleotidyltransferase Neighboring gene Histone superfamily protein Neighboring gene Translation elongation factor EF1B/ribosomal protein S6 family protein Neighboring gene mechanosensitive channel of small conductance-like 9 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene thermosome subunit gamma

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In vitro protein import of a putative amino acid transporter from Arabidopsis thaliana into chloroplasts and its suborganellar localization. Sattasuk K, et al. Biosci Biotechnol Biochem, 2011. PMID 22056429
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. At5g19500p was successfully imported into chloroplasts, and the newly transported mature form of At5g19500p was recovered from the inner envelope membrane.
      Title: In vitro protein import of a putative amino acid transporter from Arabidopsis thaliana into chloroplasts and its suborganellar localization.
    Submit: New GeneRIF Correction

    General gene information

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    NM_121955.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast inner membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Tryptophan/tyrosine permease
    NP_197451.2
    • Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6578890..6581945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121955.3 → NP_197451.2  Tryptophan/tyrosine permease [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197451.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G2P7, Q5PP33
      Conserved Domains (1) summary
      cl00456
      Location:109 → 491
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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