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    Vmn1r208 vomeronasal 1 receptor 208 [ Mus musculus (house mouse) ]

    Gene ID: 171252, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r208provided by MGI
    Official Full Name
    vomeronasal 1 receptor 208provided by MGI
    Primary source
    MGI:MGI:2159668
    See related
    Ensembl:ENSMUSG00000071493 AllianceGenome:MGI:2159668
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rh9; Vmn1r208-ps
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vmn1r208 in Genome Data Viewer
    Location:
    13 A3.1; 13 9.15 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22956569..22957495, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (22772399..22773325, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 112 Neighboring gene vomeronasal 1 receptor, pseudogene 113 Neighboring gene STARR-seq mESC enhancer starr_33911 Neighboring gene STARR-seq mESC enhancer starr_33913 Neighboring gene vomeronasal 1 receptor 209 Neighboring gene STARR-seq mESC enhancer starr_33914 Neighboring gene vomeronasal 1 receptor 210

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal 1 receptor 208
    Names
    vomernasal 1 receptor Vmn1r208
    vomeronasal 1 receptor 208, pseudogene
    vomeronasal 1 receptor, H9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134218.1NP_598979.1  vomeronasal 1 receptor 208

      See identical proteins and their annotated locations for NP_598979.1

      Status: VALIDATED

      Source sequence(s)
      AY065535
      Consensus CDS
      CCDS36616.1
      UniProtKB/TrEMBL
      Q8R275
      Related
      ENSMUSP00000128942.2, ENSMUST00000124841.3
      Conserved Domains (1) summary
      pfam03402
      Location:37299
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      22956569..22957495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)