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    NCKAP5-AS2 NCKAP5 antisense RNA 2 [ Homo sapiens (human) ]

    Gene ID: 101928161, updated on 10-Dec-2024

    Summary

    Official Symbol
    NCKAP5-AS2provided by HGNC
    Official Full Name
    NCKAP5 antisense RNA 2provided by HGNC
    Primary source
    HGNC:HGNC:54065
    See related
    Ensembl:ENSG00000226953 AllianceGenome:HGNC:54065
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See NCKAP5-AS2 in Genome Data Viewer
    Location:
    2q21.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (133266195..133284758)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (133704834..133723397)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (134023767..134042330)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene NCK associated protein 5 Neighboring gene NCKAP5 antisense RNA 1 Neighboring gene uncharacterized LOC112268439 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:133713724-133714923 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:133803163-133804362 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:133897156-133897670 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:133897671-133898183 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:134023302-134023925 Neighboring gene RNA, U6 small nuclear 579, pseudogene Neighboring gene RN7SK pseudogene 154

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110294.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010890
      Related
      ENST00000432414.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      133266195..133284758
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      133704834..133723397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)