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    Zfp975 zinc finger protein 975 [ Mus musculus (house mouse) ]

    Gene ID: 434179, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zfp975provided by MGI
    Official Full Name
    zinc finger protein 975provided by MGI
    Primary source
    MGI:MGI:3648690
    See related
    Ensembl:ENSMUSG00000069727 AllianceGenome:MGI:3648690
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm5595; mszf88; EG434179
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in embryo. Orthologous to human ZNF14 (zinc finger protein 14). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in bladder adult (RPKM 2.0), placenta adult (RPKM 1.7) and 22 other tissues See more
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    Genomic context

    See Zfp975 in Genome Data Viewer
    Location:
    7 B3; 7 28.25 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (42309529..42342191, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (42660105..42692810, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_18744 Neighboring gene predicted gene, 21028 Neighboring gene zinc finger protein 977 Neighboring gene zinc finger protein 976 Neighboring gene STARR-seq mESC enhancer starr_18745 Neighboring gene STARR-seq mESC enhancer starr_18747 Neighboring gene predicted gene, 38998 Neighboring gene zinc finger protein 120-like Neighboring gene ribosomal protein L18A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in nucleus  

    General protein information

    Preferred Names
    uncharacterized protein LOC434179

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008427.2NP_001008427.1  uncharacterized protein LOC434179 isoform 1

      See identical proteins and their annotated locations for NP_001008427.1

      Status: VALIDATED

      Source sequence(s)
      AC102628
      Consensus CDS
      CCDS39926.1
      UniProtKB/TrEMBL
      Q6NVD6
      Related
      ENSMUSP00000103626.2, ENSMUST00000107992.2
      Conserved Domains (5) summary
      smart00349
      Location:446
      KRAB; krueppel associated box
      COG5048
      Location:98514
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:441461
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:443
      KRAB; KRAB box
      pfam13465
      Location:173197
      zf-H2C2_2; Zinc-finger double domain
    2. NM_001419398.1NP_001406327.1  uncharacterized protein LOC434179 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC102628

    RNA

    1. NR_185070.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC102628

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      42309529..42342191 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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