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    Armc12 armadillo repeat containing 12 [ Mus musculus (house mouse) ]

    Gene ID: 67645, updated on 9-Dec-2024

    Summary

    Official Symbol
    Armc12provided by MGI
    Official Full Name
    armadillo repeat containing 12provided by MGI
    Primary source
    MGI:MGI:1914895
    See related
    Ensembl:ENSMUSG00000024223 AllianceGenome:MGI:1914895
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930511I11Rik
    Summary
    Involved in sperm mitochondrial sheath assembly. Located in mitochondrial outer membrane. Human ortholog(s) of this gene implicated in spermatogenic failure 90. Orthologous to human ARMC12 (armadillo repeat containing 12). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 230.2) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Armc12 in Genome Data Viewer
    Location:
    17 A3.3; 17 14.74 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (28749835..28757949)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (28530861..28538975)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene FK506 binding protein 5 Neighboring gene predicted gene, 22146 Neighboring gene RIKEN cDNA E230001N04 gene Neighboring gene STARR-positive B cell enhancer ABC_E10942 Neighboring gene predicted gene, 41506 Neighboring gene STARR-seq mESC enhancer starr_42217 Neighboring gene colipase-like 2 Neighboring gene microRNA 6969 Neighboring gene colipase, pancreatic

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in flagellated sperm motility IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cell growth ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cell growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sperm mitochondrial sheath assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    armadillo repeat-containing protein 12
    Names
    testis specific expressed protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026290.3NP_080566.2  armadillo repeat-containing protein 12

      See identical proteins and their annotated locations for NP_080566.2

      Status: VALIDATED

      Source sequence(s)
      AC154912, AK015756
      Consensus CDS
      CCDS28579.1
      UniProtKB/Swiss-Prot
      Q80X86, Q9D564, Q9DAN7
      UniProtKB/TrEMBL
      C0IQA5
      Related
      ENSMUSP00000156794.2, ENSMUST00000233923.2
      Conserved Domains (1) summary
      pfam04826
      Location:66308
      Arm_2; Armadillo-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      28749835..28757949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)