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    ILL1 IAA-leucine resistant (ILR)-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835766, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ILL1
    Official Full Name
    IAA-leucine resistant (ILR)-like 1
    Primary source
    TAIR:AT5G56650
    Locus tag
    AT5G56650
    See related
    Araport:AT5G56650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    IAA-leucine resistant (ILR)-like 1; MIK19.10; MIK19_10
    Summary
    encodes a protein similar to IAA conjugate hydrolases. Enzyme assays with purified GST-tagged protein shows some activity in vitro but too low to be physiologically significant.
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    Genomic context

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    See ILL1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (22930775..22932822)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phosphofructokinase 7 Neighboring gene myo-inositol oxygenase 5 Neighboring gene ncRNA Neighboring gene IAA-leucine resistant (ILR)-like 2 Neighboring gene Ribosomal protein S30 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a family of IAA-amino acid conjugate hydrolases from Arabidopsis. LeClere S, et al. J Biol Chem, 2002 Jun 7. PMID 11923288
    2. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125048.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables IAA-amino acid conjugate hydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in auxin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within auxin metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    IAA-leucine resistant (ILR)-like 1
    NP_200476.1
    • IAA-leucine resistant (ILR)-like 1 (ILL1); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168); BEST Arabidopsis thaliana protein match is: IAA-leucine resistant (ILR)-like 2 (TAIR:AT5G56660.1); Has 13181 Blast hits to 13171 proteins in 2001 species: Archae - 137; Bacteria - 9700; Metazoa - 62; Fungi - 245; Plants - 308; Viruses - 0; Other Eukaryotes - 2729 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22930775..22932822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345211.1 → NP_001332665.1  IAA-leucine resistant (ILR)-like 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1R7T3B5
      Conserved Domains (1) summary
      PLN02693
      Location:1 → 308
      PLN02693; IAA-amino acid hydrolase

    2. NM_125048.2 → NP_200476.1  IAA-leucine resistant (ILR)-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200476.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P54969
      UniProtKB/TrEMBL
      A0A5S9YFB4, A0A654GBP5, Q67YZ8
      Conserved Domains (1) summary
      PLN02693
      Location:1 → 438
      PLN02693; IAA-amino acid hydrolase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P54969.1

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