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    Nxpe1 neurexophilin and PC-esterase domain family, member 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500992, updated on 9-Dec-2024

    Summary

    Official Symbol
    Nxpe1provided by RGD
    Official Full Name
    neurexophilin and PC-esterase domain family, member 1provided by RGD
    Primary source
    RGD:1566243
    See related
    EnsemblRapid:ENSRNOG00000027730 AllianceGenome:RGD:1566243
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1566243
    Summary
    Orthologous to human NXPE1 (neurexophilin and PC-esterase domain family member 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Spleen (RPKM 76.3), Heart (RPKM 75.5) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Nxpe1 in Genome Data Viewer
    Location:
    8q23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (57642308..57670280)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (48749250..48773762)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (52741293..52775469)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480045 Neighboring gene neurexophilin and PC-esterase domain family member 4 Neighboring gene neurexophilin and PC-esterase domain family, member 2 Neighboring gene RNA exonuclease 2 Neighboring gene RNA binding motif protein 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134635.1NP_001128107.1  NXPE family member 1

      See identical proteins and their annotated locations for NP_001128107.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473975
      UniProtKB/TrEMBL
      A6J492, F1M016
      Related
      ENSRNOP00000051143.4, ENSRNOT00000047264.6
      Conserved Domains (1) summary
      pfam06312
      Location:76214
      Neurexophilin; Neurexophilin

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      57642308..57670280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017595842.3XP_017451331.1  NXPE family member 1 isoform X1

      UniProtKB/TrEMBL
      M0RBP3
      Conserved Domains (1) summary
      pfam06312
      Location:138276
      Neurexophilin; Neurexophilin
    2. XM_006243018.5XP_006243080.1  NXPE family member 1 isoform X1

      See identical proteins and their annotated locations for XP_006243080.1

      UniProtKB/TrEMBL
      M0RBP3
      Conserved Domains (1) summary
      pfam06312
      Location:138276
      Neurexophilin; Neurexophilin
    3. XM_006243019.5XP_006243081.1  NXPE family member 1 isoform X1

      See identical proteins and their annotated locations for XP_006243081.1

      UniProtKB/TrEMBL
      M0RBP3
      Related
      ENSRNOP00000066987.2, ENSRNOT00000072518.4
      Conserved Domains (1) summary
      pfam06312
      Location:138276
      Neurexophilin; Neurexophilin
    4. XM_063265986.1XP_063122056.1  NXPE family member 1 isoform X1

      UniProtKB/TrEMBL
      M0RBP3