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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001297576.2 → NP_001284505.1 astrocytic phosphoprotein PEA-15 isoform a
See identical proteins and their annotated locations for NP_001284505.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AK095879, AL121987, BC010469, BC022554, DA131259
- Consensus CDS
-
CCDS72954.1
- UniProtKB/TrEMBL
-
Q6FHL9
- Related
- ENSP00000357055.1, ENST00000368076.1
- Conserved Domains (1) summary
-
- cd08338
Location:23 → 106
- DED_PEA15; Death Effector Domain of Astrocyte phosphoprotein PEA-15
-
NM_001297577.2 → NP_001284506.1 astrocytic phosphoprotein PEA-15 isoform b
See identical proteins and their annotated locations for NP_001284506.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 5' region and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus than isoform a. Variants 2 and 3 encode the same isoform (b).
- Source sequence(s)
-
BC010469, BC022554, DA131259, DA707281
- Consensus CDS
-
CCDS1199.1
- UniProtKB/Swiss-Prot
- B1AKZ3, O00511, Q15121
- UniProtKB/TrEMBL
- B1AKZ4, D3DVE5, Q6FHL9
- Conserved Domains (1) summary
-
- cd08338
Location:2 → 85
- DED_PEA15; Death Effector Domain of Astrocyte phosphoprotein PEA-15
-
NM_001297578.2 → NP_001284507.1 astrocytic phosphoprotein PEA-15 isoform c
See identical proteins and their annotated locations for NP_001284507.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two alternate exons and uses an alternate in-frame splice site in the 5' region, compared to variant 1. It initiates translation at a downstream in-frame start codon. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AL121987, BC010469, BC022554, DA157938
- Consensus CDS
-
CCDS76227.1
- UniProtKB/TrEMBL
- B1AKZ5, Q6FHL9
- Related
- ENSP00000357056.1, ENST00000368077.5
- Conserved Domains (1) summary
-
- cl14633
Location:2 → 63
- DD; Death Domain Superfamily of protein-protein interaction domains
-
NM_003768.5 → NP_003759.1 astrocytic phosphoprotein PEA-15 isoform b
See identical proteins and their annotated locations for NP_003759.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two alternate exons in the 5' region and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus than isoform a. Variants 2 and 3 encode the same isoform (b).
- Source sequence(s)
-
BC002426, BC010469, BC022554, DA131259
- Consensus CDS
-
CCDS1199.1
- UniProtKB/Swiss-Prot
- B1AKZ3, O00511, Q15121
- UniProtKB/TrEMBL
- B1AKZ4, D3DVE5, Q6FHL9
- Related
- ENSP00000353660.5, ENST00000360472.9
- Conserved Domains (1) summary
-
- cd08338
Location:2 → 85
- DED_PEA15; Death Effector Domain of Astrocyte phosphoprotein PEA-15
RNA
-
NR_123724.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks three internal exons, compared to variant 1. This variant is represented as non-coding because it lacks a large portion of the coding region found in variant 1.
- Source sequence(s)
-
BC010469, BC022554, DA131259, DA538845
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
160205384..160215372
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047433391.1 → XP_047289347.1 astrocytic phosphoprotein PEA-15 isoform X1
- UniProtKB/TrEMBL
-
Q6FHL9
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
159342460..159352445
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054339396.1 → XP_054195371.1 astrocytic phosphoprotein PEA-15 isoform X1
- UniProtKB/TrEMBL
-
Q6FHL9