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    SK14 SKP1-like 14 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814846, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SK14
    Official Full Name
    SKP1-like 14
    Primary source
    TAIR:AT2G03170
    Locus tag
    AT2G03170
    See related
    Araport:AT2G03170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ASK14; SKP1-like 14; T18E12.16; T18E12_16
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    Genomic context

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    See SK14 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (961308..961771)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ATP/GTP-binding protein family Neighboring gene SKP1-like 19 Neighboring gene uncharacterized protein Neighboring gene SKP1-like 16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. F-box protein DOR functions as a novel inhibitory factor for abscisic acid-induced stomatal closure under drought stress in Arabidopsis, Zhang Y, et al. Plant Physiol, 2008 Dec. PMID 18835996, Free PMC Article
    2. A high-throughput system for two-hybrid screening based on growth curve analysis in microtiter plates. Diaz-Camino C, et al. Anal Biochem, 2003 May 15. PMID 12711337
    3. EDL3 is an F-box protein involved in the regulation of abscisic acid signalling in Arabidopsis thaliana. Koops P, et al. J Exp Bot, 2011 Nov. PMID 21831845, Free PMC Article
    4. An F-box gene, CPR30, functions as a negative regulator of the defense response in Arabidopsis. Gou M, et al. Plant J, 2009 Dec. PMID 19682297
    5. Identification of ASK and clock-associated proteins as molecular partners of LKP2 (LOV kelch protein 2) in Arabidopsis. Yasuhara M, et al. J Exp Bot, 2004 Sep. PMID 15310821

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SKP1-like 14
    NP_565296.1
    • SKP1-like 14 (SK14); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 16 (TAIR:AT2G03190.1); Has 1405 Blast hits to 1401 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 530; Fungi - 176; Plants - 531; Viruses - 11; Other Eukaryotes - 157 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      961308..961771
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126368.2 → NP_565296.1  SKP1-like 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565296.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81057
      UniProtKB/TrEMBL
      A0A178VVZ2
      Conserved Domains (3) summary
      smart00512
      Location:3 → 99
      Skp1; Found in Skp1 protein family
      COG5201
      Location:3 → 147
      SKP1; SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
      pfam01466
      Location:72 → 147
      Skp1; Skp1 family, dimerization domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81057.1

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