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    DABB1 dimeric A/B barrel domainS-protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841560, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DABB1
    Official Full Name
    dimeric A/B barrel domainS-protein 1
    Primary source
    TAIR:AT1G51360
    Locus tag
    AT1G51360
    See related
    Araport:AT1G51360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATDABB1; dimeric A/B barrel domainS-protein 1; DIMERIC A/B BARREL DOMAINS-PROTEIN 1; F11M15.22; F11M15_22
    Summary
    Involved in defense against fungal pathogens and located in cytosol.
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    Genomic context

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    See DABB1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (19044163..19044953)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ARM repeat superfamily protein Neighboring gene cyclin-dependent kinase inhibitor SMR3-like protein Neighboring gene F-box/RNI-like/FBD-like domains-containing protein Neighboring gene DEA(D/H)-box RNA helicase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characterization of pathogen-responsive protein AtDabb1 with an antifungal activity from Arabidopsis thaliana. Lee JR, et al. Biochim Biophys Acta, 2008 Dec. PMID 18674644
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104014.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to fungus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to fungus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to jasmonic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    dimeric A/B barrel domainS-protein 1
    NP_175547.1
    • dimeric A/B barrel domainS-protein 1 (DABB1); CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: Stress responsive alpha-beta barrel domain protein (TAIR:AT2G31670.1); Has 154 Blast hits to 154 proteins in 49 species: Archae - 2; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19044163..19044953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104014.4 → NP_175547.1  dimeric A/B barrel domainS-protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175547.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYD8
      UniProtKB/TrEMBL
      A0A7G2DWX2
      Conserved Domains (1) summary
      pfam07876
      Location:5 → 101
      Dabb; Stress responsive A/B Barrel Domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SYD8.1

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