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    Acid phosphatase/vanadium-dependent haloperoxidase-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839051, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    Primary source
    TAIR:AT1G24350
    Locus tag
    AT1G24350
    See related
    Araport:AT1G24350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3I6.29; F3I6_29
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (8638520..8640825, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein Neighboring gene Six-hairpin glycosidases superfamily protein Neighboring gene ARM repeat superfamily protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene pseudo Neighboring gene no-apical-meristem-associated carboxy-terminal domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084125.2
    NM_001198155.1
    NM_001332647.1
    NM_001332648.1
    NM_102281.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    NP_001077594.1
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1118 Blast hits to 1118 proteins in 412 species: Archae - 0; Bacteria - 737; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).
    NP_001185084.1
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1).
    NP_564215.1
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1124 Blast hits to 1124 proteins in 413 species: Archae - 0; Bacteria - 739; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8638520..8640825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102281.2 → NP_564215.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564215.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2C8, A0A7G2DVU8, B9DG97, Q8LC64
      Conserved Domains (1) summary
      pfam02681
      Location:20 → 155
      DUF212; Divergent PAP2 family

    2. NM_001084125.2 → NP_001077594.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077594.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DVU8, Q8GYY2, Q8LC64
      Conserved Domains (1) summary
      pfam02681
      Location:27 → 144
      DUF212; Divergent PAP2 family

    3. NM_001198155.1 → NP_001185084.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185084.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I989, O04464
      Conserved Domains (1) summary
      pfam02681
      Location:27 → 170
      DUF212; Divergent PAP2 family

    4. NM_001332647.1 → NP_001323066.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AW28, A0A7G2DVU8, Q8LC64

    5. NM_001332648.1 → NP_001323067.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DVU8, Q8LC64, Q9FYM6
    Nucleotide Protein
    Heading Accession and Version

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