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    Nucleolar GTP-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837569, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleolar GTP-binding protein
    Primary source
    TAIR:AT1G10300
    Locus tag
    AT1G10300
    See related
    Araport:AT1G10300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14N23.18; F14N23_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (3377878..3380414)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glutamine-rich protein 23 Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene dynamin-like protein 6 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The small GTPase, nucleolar GTP-binding protein 1 (NOG1), has a novel role in plant innate immunity. Lee S, et al. Sci Rep, 2017 Aug 23. PMID 28835689, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100904.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables GTPase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within stomatal movement IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleolar GTP-binding protein
    NP_172501.1
    • Nucleolar GTP-binding protein; FUNCTIONS IN: GTP binding; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), Nucleolar GTP-binding 1 (InterPro:IPR010674), NOG, C-terminal (InterPro:IPR012973); BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G50920.1); Has 8833 Blast hits to 8598 proteins in 2008 species: Archae - 347; Bacteria - 5084; Metazoa - 895; Fungi - 393; Plants - 246; Viruses - 2; Other Eukaryotes - 1866 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3377878..3380414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331896.1 → NP_001322861.1  Nucleolar GTP-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AV84, A0A7G2DVQ7

    2. NM_001331897.1 → NP_001322862.1  Nucleolar GTP-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DVQ7, F4I4A6

    3. NM_100904.1 → NP_172501.1  Nucleolar GTP-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172501.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DVQ7, F4I4A6
      Conserved Domains (3) summary
      cd01897
      Location:198 → 368
      NOG; Nucleolar GTP-binding protein (NOG)
      COG1084
      Location:34 → 366
      Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]
      pfam08155
      Location:420 → 472
      NOGCT; NOGCT (NUC087) domain
    Nucleotide Protein
    Heading Accession and Version

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