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    Zn-dependent exopeptidases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843062, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Zn-dependent exopeptidases superfamily protein
    Primary source
    TAIR:AT1G67420
    Locus tag
    AT1G67420
    See related
    Araport:AT1G67420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1F15.12; T1F15_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    19
    Sequence:
    Chromosome: 1; NC_003070.9 (25255155..25260590)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene ELMO/CED-12 family protein Neighboring gene Exostosin family protein Neighboring gene Ribosomal protein L22p/L17e family protein Neighboring gene ncRNA Neighboring gene Minichromosome maintenance (MCM2/3/5) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105409.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables metalloexopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Zn-dependent exopeptidases superfamily protein
    NP_001185342.1
    • Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1).
    NP_176909.3
    • Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1); Has 1831 Blast hits to 1821 proteins in 500 species: Archae - 17; Bacteria - 819; Metazoa - 494; Fungi - 278; Plants - 79; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25255155..25260590
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334293.1 → NP_001321981.1  Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASP6, A0A7G2E400

    2. NM_001334294.1 → NP_001321979.1  Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASM6, A0A5S9WSR8

    3. NM_001198413.2 → NP_001185342.1  Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185342.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WSR8, F4HRW2
      Conserved Domains (1) summary
      cd03875
      Location:98 → 417
      M28_Fxna_like; M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1

    4. NM_001334295.1 → NP_001321978.1  Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASJ1, A0A7G2E400

    5. NM_001334296.1 → NP_001321980.1  Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASK2, A0A7G2E400

    6. NM_105409.5 → NP_176909.3  Zn-dependent exopeptidases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176909.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2E400, F4HRW3
      Conserved Domains (1) summary
      cd03875
      Location:49 → 368
      M28_Fxna_like; M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1
    Nucleotide Protein
    Heading Accession and Version

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