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    CCT motif family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839510, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CCT motif family protein
    Primary source
    TAIR:AT1G04500
    Locus tag
    AT1G04500
    See related
    Araport:AT1G04500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19P19.3; F19P19_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (1221411..1224539, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L14p/L23e family protein Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF3527) Neighboring gene MOS4-associated complex 3A Neighboring gene plasmodesmata-located protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001331488.1
    NM_001331489.1
    NM_001331490.1
    NM_100329.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of flower development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CCT motif family protein
    NP_001318920.1
    • CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1221411..1224539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331488.1 → NP_001318920.1  CCT motif family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIT7, A0A654E719, Q1PFY7
      Conserved Domains (1) summary
      pfam06203
      Location:288 → 331
      CCT; CCT motif

    2. NM_001331489.1 → NP_001322236.1  CCT motif family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATH6, A0A7G2DRU7

    3. NM_001331490.1 → NP_001322235.1  CCT motif family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIT7, A0A1P8ATF4

    4. NM_100329.3 → NP_171944.2  CCT motif family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171944.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIT7, A0A654E719, Q1PFY7
      Conserved Domains (1) summary
      pfam06203
      Location:288 → 331
      CCT; CCT motif
    Nucleotide Protein
    Heading Accession and Version

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