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    filament-like protein (DUF869) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838784, updated on 18-Sep-2024

    Summary

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    Official Full Name
    filament-like protein (DUF869)
    Primary source
    TAIR:AT1G21810
    Locus tag
    AT1G21810
    See related
    Araport:AT1G21810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T26F17.2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (7656319..7659167, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein Neighboring gene tRNA-Gln Neighboring gene uncharacterized protein Neighboring gene Plant thionin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel coiled-coil proteins regulate exocyst association with cortical microtubules in xylem cells via the conserved oligomeric golgi-complex 2 protein. Oda Y, et al. Plant Cell Physiol, 2015 Feb. PMID 25541219
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102029.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein-macromolecule adaptor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of exocyst localization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of exocyst localization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    colocalizes_with cortical microtubule plus-end IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    filament-like protein (DUF869)
    NP_173599.2
    • Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G77580.1); Has 79141 Blast hits to 43153 proteins in 2526 species: Archae - 1269; Bacteria - 11097; Metazoa - 38829; Fungi - 6739; Plants - 4917; Viruses - 325; Other Eukaryotes - 15965 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7656319..7659167 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332529.1 → NP_001320941.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HZP6, Q0WRM5, Q84WK7, Q9SFF4, Q9XHZ6
      UniProtKB/TrEMBL
      A0A178WJ18
      Conserved Domains (2) summary
      COG1196
      Location:273 → 528
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam05911
      Location:16 → 292
      FPP; Filament-like plant protein, long coiled-coil

    2. NM_001332528.1 → NP_001320940.1  filament-like protein (DUF869) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJ18, A0A1P8APB6, A0A7G2DSA2

    3. NM_102029.3 → NP_173599.2  filament-like protein (DUF869) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HZP6, Q0WRM5, Q84WK7, Q9SFF4, Q9XHZ6
      UniProtKB/TrEMBL
      A0A178WJ18
      Conserved Domains (2) summary
      COG1196
      Location:273 → 528
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam05911
      Location:16 → 292
      FPP; Filament-like plant protein, long coiled-coil
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SFF4.1

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