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    MT1C metallothionein 1C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837274, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MT1C
    Official Full Name
    metallothionein 1C
    Primary source
    TAIR:AT1G07610
    Locus tag
    AT1G07610
    See related
    Araport:AT1G07610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22G5.40; metallothionein 1C
    Summary
    one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance.
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    Genomic context

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    See MT1C in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (2341447..2342148)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene metallothionein 1A Neighboring gene ncRNA Neighboring gene GTP-binding protein Obg/CgtA Neighboring gene GTP-binding protein Obg/CgtA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure, organization and expression of the metallothionein gene family in Arabidopsis. Zhou J, et al. Mol Gen Genet, 1995 Aug 21. PMID 7565594
    2. High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Giavalisco P, et al. Plant Mol Biol, 2005 Mar. PMID 15821981
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100634.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to copper ion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosolic ribosome HDA PubMed 

    General protein information

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    Preferred Names
    metallothionein 1C
    NP_172240.1
    • metallothionein 1C (MT1C); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to copper ion; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: metallothionein 1A (TAIR:AT1G07600.1); Has 443 Blast hits to 367 proteins in 121 species: Archae - 0; Bacteria - 4; Metazoa - 106; Fungi - 13; Plants - 241; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2341447..2342148
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100634.2 → NP_172240.1  metallothionein 1C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172240.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q38804
      UniProtKB/TrEMBL
      A0A5S9T5C1, A0A654E7K5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q38804.1

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