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    Mediator complex, subunit Med10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839207, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mediator complex, subunit Med10
    Primary source
    TAIR:AT1G26665
    Locus tag
    AT1G26665
    See related
    Araport:AT1G26665
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (9214072..9215557)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Son of sevenless protein Neighboring gene Prefoldin chaperone subunit family protein Neighboring gene Vesicle transport v-SNARE family protein Neighboring gene transcriptional factor B3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Repression by the Arabidopsis TOPLESS corepressor requires association with the core mediator complex. Leydon AR, et al. Elife, 2021 Jun 2. PMID 34075876, Free PMC Article
    2. Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. Bäckström S, et al. Mol Cell, 2007 Jun 8. PMID 17560376
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102429.4
    NM_202187.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mediator complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mediator complex, subunit Med10
    NP_564254.1
    • Mediator complex, subunit Med10; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med10 (InterPro:IPR019145); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med10 (TAIR:AT5G41910.1); Has 312 Blast hits to 312 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 138; Fungi - 119; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    NP_973916.1
    • Mediator complex, subunit Med10; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription from RNA polymerase II promoter; LOCATED IN: mediator complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med10 (InterPro:IPR019145); BEST Arabidopsis thaliana protein match is: Mediator complex, subunit Med10 (TAIR:AT5G41910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9214072..9215557
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102429.4 → NP_564254.1  Mediator complex, subunit Med10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564254.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLN5, A0A5S9W1J5, A0A654ED20
      Conserved Domains (1) summary
      pfam09748
      Location:44 → 158
      Med10; Transcription factor subunit Med10 of Mediator complex

    2. NM_202187.2 → NP_973916.1  Mediator complex, subunit Med10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973916.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HPA7, Q93WN1, Q9LQY6
      UniProtKB/TrEMBL
      A0A5S9W1J5, A0A654ED20
      Conserved Domains (1) summary
      pfam09748
      Location:44 → 158
      Med10; Transcription factor subunit Med10 of Mediator complex
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HPA7.1

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