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    HAB2 homology to ABI2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838330, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HAB2
    Official Full Name
    homology to ABI2
    Primary source
    TAIR:AT1G17550
    Locus tag
    AT1G17550
    See related
    Araport:AT1G17550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtHAB2; F1L3.38; homology to ABI2
    Summary
    Protein Phosphatase 2C
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    Genomic context

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    See HAB2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (6034270..6037398)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene kinase with adenine nucleotide alpha hydrolases-like domain-containing protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene Ribosomal protein L14p/L23e family protein Neighboring gene tRNA-Ser

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular basis for the selective and ABA-independent inhibition of PP2CA by PYL13. Li W, et al. Cell Res, 2013 Dec. PMID 24165892, Free PMC Article
    2. PYRABACTIN RESISTANCE1-LIKE8 plays an important role for the regulation of abscisic acid signaling in root. Antoni R, et al. Plant Physiol, 2013 Feb. PMID 23370718, Free PMC Article
    3. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data indicate that PYL8 interacted in vivo with at least five PP2Cs, namely HAB1, HAB2, ABI1, ABI2, and PP2CA.
      Title: PYRABACTIN RESISTANCE1-LIKE8 plays an important role for the regulation of abscisic acid signaling in root.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332312.1
    NM_101618.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    homology to ABI2
    NP_173199.2
    • homology to ABI2 (HAB2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI1 (TAIR:AT1G72770.3); Has 6552 Blast hits to 6537 proteins in 424 species: Archae - 4; Bacteria - 229; Metazoa - 1602; Fungi - 744; Plants - 2705; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6034270..6037398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101618.3 → NP_173199.2  homology to ABI2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173199.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWS8, Q9LNP9
      UniProtKB/TrEMBL
      A0A178WLC3, A0A5S9UUN1, A0A654ELH3
      Conserved Domains (1) summary
      smart00332
      Location:179 → 499
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain

    2. NM_001332312.1 → NP_001322988.1  homology to ABI2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWS8, Q9LNP9
      UniProtKB/TrEMBL
      A0A178WLC3, A0A5S9UUN1, A0A654ELH3
      Conserved Domains (1) summary
      smart00332
      Location:179 → 499
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LNP9.2

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