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    • Showing Current items.

    BNS bonsai [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843651, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BNS
    Official Full Name
    bonsai
    Primary source
    TAIR:AT1G73177
    Locus tag
    AT1G73177
    See related
    Araport:AT1G73177
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    anaphase-promoting complex 13; APC13; BONSAI
    Summary
    The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development.
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    Genomic context

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    See BNS in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (27516572..27517882, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene miscRNA Neighboring gene Eukaryotic translation initiation factor eIF2A family protein Neighboring gene Aquaporin-like superfamily protein Neighboring gene testis-expressed sequence 2-like protein (DUF2404)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1. Saze H, et al. EMBO J, 2007 Aug 8. PMID 17627280, Free PMC Article
    2. The anaphase-promoting complex is a dual integrator that regulates both MicroRNA-mediated transcriptional regulation of cyclin B1 and degradation of Cyclin B1 during Arabidopsis male gametophyte development. Zheng B, et al. Plant Cell, 2011 Mar. PMID 21441434, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334573.1
    NM_001334574.1
    NM_105976.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within inflorescence development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in miRNA transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within phyllome development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen maturation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of anaphase-promoting complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of anaphase-promoting complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    bonsai
    NP_565057.1
    • BONSAI (BNS); Has 44 Blast hits to 44 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27516572..27517882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105976.3 → NP_565057.1  bonsai [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565057.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L981
      UniProtKB/TrEMBL
      A0A178WGX5, A0A5S9WTZ5

    2. NM_001334573.1 → NP_001321719.1  bonsai [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARS8

    3. NM_001334574.1 → NP_001321718.1  bonsai [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARS8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L981.1

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