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    GLIP6 GDSL-motif lipase/hydrolase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843452, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GLIP6
    Official Full Name
    GDSL-motif lipase/hydrolase 6
    Primary source
    TAIR:AT1G71120
    Locus tag
    AT1G71120
    See related
    Araport:AT1G71120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N20.11; F23N20_11; GDSL-motif lipase/hydrolase 6
    Summary
    Contains lipase signature motif and GDSL domain.
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    Genomic context

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    See GLIP6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (26821072..26822487, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Auxin efflux carrier family protein Neighboring gene Ribose 5-phosphate isomerase, type A protein Neighboring gene uncharacterized protein Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene MATE efflux family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Secretome analysis reveals an Arabidopsis lipase involved in defense against Alternaria brassicicola. Oh IS, et al. Plant Cell, 2005 Oct. PMID 16126835, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105781.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GDSL-motif lipase/hydrolase 6
    NP_177268.1
    • GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26821072..26822487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105781.2 → NP_177268.1  GDSL-motif lipase/hydrolase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177268.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C996
      UniProtKB/TrEMBL
      A0A178WCW6, A0A5S9WTI7
      Conserved Domains (1) summary
      cd01837
      Location:30 → 343
      SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C996.1

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