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    HIR2 SPFH/Band 7/PHB domain-containing membrane-associated protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821309, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HIR2
    Official Full Name
    SPFH/Band 7/PHB domain-containing membrane-associated protein family
    Primary source
    TAIR:AT3G01290
    Locus tag
    AT3G01290
    See related
    Araport:AT3G01290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtHIR2; hypersensitive induced reaction 2; T22N4.8; T22N4_8
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    Genomic context

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    See HIR2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (87684..89593, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Galactose mutarotase-like superfamily protein Neighboring gene Pectate lyase family protein Neighboring gene voltage dependent anion channel 1 Neighboring gene Protein kinase superfamily protein Neighboring gene Phosphoglycerate mutase-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Physical association of Arabidopsis hypersensitive induced reaction proteins (HIRs) with the immune receptor RPS2. Qi Y, et al. J Biol Chem, 2011 Sep 9. PMID 21757708, Free PMC Article
    2. Purification of low-abundance Arabidopsis plasma-membrane protein complexes and identification of candidate components. Qi Y, et al. Plant J, 2009 Mar. PMID 19000159
    3. An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease. Hok S, et al. Plant Cell Environ, 2011 Nov. PMID 21711359
    4. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
    5. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_110995.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oomycetes IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    SPFH/Band 7/PHB domain-containing membrane-associated protein family
    NP_566135.1
    • SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: mitochondrion, plasma membrane, vacuole, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 7523 Blast hits to 7522 proteins in 1968 species: Archae - 210; Bacteria - 4831; Metazoa - 573; Fungi - 279; Plants - 280; Viruses - 3; Other Eukaryotes - 1347 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      87684..89593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_110995.3 → NP_566135.1  SPFH/Band 7/PHB domain-containing membrane-associated protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566135.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SRH6
      UniProtKB/TrEMBL
      A0A178V7M0, A0A5S9X836
      Conserved Domains (1) summary
      cd03407
      Location:10 → 278
      SPFH_like_u4; Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SRH6.1

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