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    hypothetical protein (DUF3511) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820604, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF3511)
    Primary source
    TAIR:AT3G13910
    Locus tag
    AT3G13910
    See related
    Araport:AT3G13910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (4590684..4591541, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene myb domain protein 26 Neighboring gene EPIDERMAL PATTERNING FACTOR-like protein Neighboring gene ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Neighboring gene eukaryotic translation initiation factor 4A1 Neighboring gene ncRNA Neighboring gene Dihydrolipoamide acetyltransferase, long form protein Neighboring gene DNA binding / DNA-directed RNA polymerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH. Brown BA, et al. Plant Physiol, 2008 Feb. PMID 18055587, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_112245.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF3511)
    NP_566468.1
    • Protein of unknown function (DUF3511); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3511 (InterPro:IPR021899); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3511) (TAIR:AT5G11970.1); Has 203 Blast hits to 203 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4590684..4591541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338091.1 → NP_001326696.1  hypothetical protein (DUF3511) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQ26, Q8LDW0

    2. NM_112245.2 → NP_566468.1  hypothetical protein (DUF3511) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566468.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VER2, A0A384KQX8, Q8LDW0, Q9LVK8
      Conserved Domains (1) summary
      pfam12023
      Location:61 → 97
      DUF3511; Domain of unknown function (DUF3511)
    Nucleotide Protein
    Heading Accession and Version

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