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    magnesium transporter NIPA (DUF803) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821970, updated on 18-Sep-2024

    Summary

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    Official Full Name
    magnesium transporter NIPA (DUF803)
    Primary source
    TAIR:AT3G23870
    Locus tag
    AT3G23870
    See related
    Araport:AT3G23870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (8619192..8621949)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene glycine-rich RNA-binding protein 4 Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene GTP-binding protein-like protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene topoisomerase II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001338658.1
    NM_001338659.1
    NM_001338660.1
    NM_001338661.1
    NM_113292.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    magnesium transporter NIPA (DUF803)
    NP_189029.1
    • Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G13800.1); Has 1388 Blast hits to 1369 proteins in 245 species: Archae - 2; Bacteria - 146; Metazoa - 422; Fungi - 370; Plants - 270; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8619192..8621949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113292.2 → NP_189029.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189029.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LIR9
      UniProtKB/TrEMBL
      A0A178VIA3, A0A5S9XF11, A0A7G2EP67
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    2. NM_001338658.1 → NP_001326607.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LIR9
      UniProtKB/TrEMBL
      A0A178VIA3, A0A5S9XF11, A0A7G2EP67
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    3. NM_001338659.1 → NP_001326608.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LIR9
      UniProtKB/TrEMBL
      A0A178VIA3, A0A5S9XF11, A0A7G2EP67
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    4. NM_001338660.1 → NP_001326605.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LIR9
      UniProtKB/TrEMBL
      A0A178VIA3, A0A5S9XF11, A0A7G2EP67
      Conserved Domains (1) summary
      pfam05653
      Location:7 → 299
      Mg_trans_NIPA; Magnesium transporter NIPA

    5. NM_001338661.1 → NP_001326606.1  magnesium transporter NIPA (DUF803) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPT2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LIR9.1

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