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    Apoptosis inhibitory protein 5 (API5) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817965, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Apoptosis inhibitory protein 5 (API5)
    Primary source
    TAIR:AT2G34040
    Locus tag
    AT2G34040
    See related
    Araport:AT2G34040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T14G11.16; T14G11_16
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    17
    Sequence:
    Chromosome: 2; NC_003071.7 (14377722..14382673, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Calcium-binding EF-hand family protein Neighboring gene Calcium-binding EF-hand family protein Neighboring gene ATP synthase F1 complex assembly factor Neighboring gene Peroxidase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Reichel M, et al. Plant Cell, 2016 Oct. PMID 27729395, Free PMC Article
    2. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
    3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001336482.1
    NM_128955.5
    NM_179893.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Apoptosis inhibitory protein 5 (API5)
    NP_565777.1
    • Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: anti-apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT1G29030.1); Has 289 Blast hits to 276 proteins in 86 species: Archae - 0; Bacteria - 4; Metazoa - 163; Fungi - 15; Plants - 77; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
    NP_850224.1
    • Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: anti-apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT1G29030.1); Has 227 Blast hits to 217 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 6; Plants - 61; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14377722..14382673 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128955.5 → NP_565777.1  Apoptosis inhibitory protein 5 (API5) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565777.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X407, A0A654F021, O22957
      Conserved Domains (2) summary
      sd00044
      Location:70 → 98
      HEAT; HEAT repeat [structural motif]
      pfam05918
      Location:12 → 526
      API5; Apoptosis inhibitory protein 5 (API5)

    2. NM_001336482.1 → NP_001324420.1  Apoptosis inhibitory protein 5 (API5) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X407, A0A654F021, O22957
      Conserved Domains (2) summary
      sd00044
      Location:70 → 98
      HEAT; HEAT repeat [structural motif]
      pfam05918
      Location:12 → 526
      API5; Apoptosis inhibitory protein 5 (API5)

    3. NM_179893.1 → NP_850224.1  Apoptosis inhibitory protein 5 (API5) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850224.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IGU7
      Conserved Domains (2) summary
      pfam05918
      Location:12 → 437
      API5; Apoptosis inhibitory protein 5 (API5)
      sd00044
      Location:70 → 98
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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