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    DUF1365 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839892, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF1365 family protein
    Primary source
    TAIR:AT1G30130
    Locus tag
    AT1G30130
    See related
    Araport:AT1G30130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2H7.7; T2H7_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (10587471..10590209)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nine-cis-epoxycarotenoid dioxygenase 5 Neighboring gene nudix hydrolase homolog 25 Neighboring gene pyruvate dehydrogenase E1 beta Neighboring gene ncRNA Neighboring gene jasmonate-zim-domain protein 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102752.4
    NM_202210.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DUF1365 family protein
    NP_564348.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920 (source: NCBI BLink).
    NP_973939.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10587471..10590209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332881.1 → NP_001322696.1  DUF1365 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4D5, Q8L8W2, Q9C6Z4

    2. NM_102752.4 → NP_564348.1  DUF1365 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564348.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4D5, Q8L8W2, Q9C6Z4
      Conserved Domains (1) summary
      cl17838
      Location:50 → 250
      DUF1365; Protein of unknown function (DUF1365)

    3. NM_202210.2 → NP_973939.1  DUF1365 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973939.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4D5, Q8L8W2, Q9C6Z4
      Conserved Domains (1) summary
      cl17838
      Location:50 → 250
      DUF1365; Protein of unknown function (DUF1365)
    Nucleotide Protein
    Heading Accession and Version

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