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    UP6 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838244, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UP6
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G16730
    Locus tag
    AT1G16730
    See related
    Araport:AT1G16730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19K19.18; unknown protein 6
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    Genomic context

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    See UP6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (5726368..5727406, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase of the CBP family 12 Neighboring gene ncRNA Neighboring gene high chlorophyll fluorescence phenotype 173 Neighboring gene ncRNA Neighboring gene Ribosomal protein L20 Neighboring gene GPI-anchored adhesin-like protein, putative (Protein of unknown function, DUF547) Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In vivo subcellular targeting analysis validates a novel peroxisome targeting signal type 2 and the peroxisomal localization of two proteins with putative functions in defense in Arabidopsis. Quan S, et al. Plant Signal Behav, 2010 Feb. PMID 20009535, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101534.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_173117.1
    • unknown protein 6 (UP6); Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5726368..5727406 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101534.3 → NP_173117.1  uncharacterized protein AT1G16730 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173117.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKQ2, Q9FWQ7
    Nucleotide Protein
    Heading Accession and Version

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