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    Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827906, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ankyrin repeat family protein
    Primary source
    TAIR:AT4G03480
    Locus tag
    AT4G03480
    See related
    Araport:AT4G03480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9H3.11; F9H3_11
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (1545470..1548871, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene Ankyrin repeat family protein Neighboring gene Ankyrin repeat family protein Neighboring gene uncharacterized protein Neighboring gene Ankyrin repeat family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ankyrin repeat family protein
    NP_192257.5
    • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 20363 Blast hits to 10320 proteins in 485 species: Archae - 23; Bacteria - 1523; Metazoa - 11338; Fungi - 1558; Plants - 2584; Viruses - 50; Other Eukaryotes - 3287 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1545470..1548871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116586.6 → NP_192257.5  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192257.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JG86, Q9ZT76
      Conserved Domains (5) summary
      cd00204
      Location:384 → 515
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:360 → 449
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:157 → 211
      Ank_4; Ankyrin repeats (many copies)
      pfam13962
      Location:588 → 659
      PGG; Domain of unknown function
      sd00045
      Location:358 → 387
      ANK; ANK repeat [structural motif]

    2. NM_001340456.1 → NP_001329132.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6T3, Q9ZT76
    Nucleotide Protein
    Heading Accession and Version

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