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    Carbohydrate-binding X8 domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826993, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Carbohydrate-binding X8 domain superfamily protein
    Primary source
    TAIR:AT4G13600
    Locus tag
    AT4G13600
    See related
    Araport:AT4G13600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6G15.150; T6G15_150
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (7911019..7912892, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene Uncharacterized protein family (UPF0016) Neighboring gene ncRNA Neighboring gene DNA (cytosine-5-)-methyltransferase family protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Carbohydrate-binding X8 domain superfamily protein
    NP_193096.5
    • Carbohydrate-binding X8 domain superfamily protein; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 3 (TAIR:AT1G18650.1); Has 487 Blast hits to 485 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 8; Plants - 474; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7911019..7912892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117434.6 → NP_193096.5  Carbohydrate-binding X8 domain superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193096.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYR2, F4JT39
      Conserved Domains (1) summary
      smart00768
      Location:61 → 144
      X8; Possibly involved in carbohydrate binding
    Nucleotide Protein
    Heading Accession and Version

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