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    sks4 SKU5 similar 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828290, updated on 18-Sep-2024

    Summary

    Official Symbol
    sks4
    Official Full Name
    SKU5 similar 4
    Primary source
    TAIR:AT4G22010
    Locus tag
    AT4G22010
    See related
    Araport:AT4G22010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N20.110; F1N20_110; SKU5 similar 4; SKU5 similar 4
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    Genomic context

    See sks4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (11663186..11666716)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like superfamily protein Neighboring gene APS reductase 3 Neighboring gene tyrosine sulfotransferase-like protein Neighboring gene miscRNA Neighboring gene F-box protein with a domain protein

    Interactions

    General gene information

    NM_118322.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding  
    enables oxidoreductase activity  
    Component Evidence Code Pubs
    located_in extracellular region  
    located_in plasmodesma PubMed 

    General protein information

    Preferred Names
    SKU5 similar 4
    NP_193932.1
    • SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11663186..11666716
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118322.4NP_193932.1  SKU5 similar 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193932.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178USM7, A0A5S9XUN4, O65449
      Conserved Domains (2) summary
      PLN02991
      Location:9538
      PLN02991; oxidoreductase
      cl19115
      Location:157292
      Cupredoxin; Cupredoxin superfamily
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