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    ATPase, V0 complex, subunit E [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828778, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATPase, V0 complex, subunit E
    Primary source
    TAIR:AT4G26710
    Locus tag
    AT4G26710
    See related
    Araport:AT4G26710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10M23.50; F10M23_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (13468423..13470030)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene fimbrin 1 Neighboring gene DNA binding / DNA topoisomerase type I Neighboring gene protein phosphatase X 1 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118805.3
    NM_202894.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of proton-transporting V-type ATPase, V0 domain IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    ATPase, V0 complex, subunit E
    NP_194401.1
    • ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT5G55290.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_974623.1
    • ATPase, V0 complex, subunit E; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP hydrolysis coupled proton transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0 complex, subunit E (InterPro:IPR008389); BEST Arabidopsis thaliana protein match is: ATPase, V0 complex, subunit E (TAIR:AT5G55290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13468423..13470030
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118805.3 → NP_194401.1  ATPase, V0 complex, subunit E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194401.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZ13
      UniProtKB/TrEMBL
      A0A178UVG9, A0A5S9XW47
      Conserved Domains (1) summary
      pfam05493
      Location:3 → 65
      ATP_synt_H; ATP synthase subunit H

    2. NM_202894.2 → NP_974623.1  ATPase, V0 complex, subunit E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974623.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZ13
      UniProtKB/TrEMBL
      A0A178UVG9, A0A5S9XW47
      Conserved Domains (1) summary
      pfam05493
      Location:3 → 65
      ATP_synt_H; ATP synthase subunit H
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZ13.1

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