U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    myosin heavy chain-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824815, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    myosin heavy chain-like protein
    Primary source
    TAIR:AT3G56480
    Locus tag
    AT3G56480
    See related
    Araport:AT3G56480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    13
    Sequence:
    Chromosome: 3; NC_003074.8 (20936098..20939631, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein Neighboring gene ncRNA Neighboring gene F-box family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene HIS triad family protein 3 Neighboring gene serine-rich protein-like protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. SCAB3 Is Required for Reorganization of Actin Filaments during Light Quality Changes. Wang C, et al. J Genet Genomics, 2015 Apr 20. PMID 25953354
    2. Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis. Li G, et al. Nat Cell Biol, 2011 May. PMID 21499259
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_115506.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within circadian rhythm IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in regulation of stomatal movement IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    myosin heavy chain-like protein
    NP_191207.2
    • myosin heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40820.1); Has 486 Blast hits to 458 proteins in 133 species: Archae - 0; Bacteria - 70; Metazoa - 142; Fungi - 25; Plants - 111; Viruses - 1; Other Eukaryotes - 137 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20936098..20939631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115506.3 → NP_191207.2  myosin heavy chain-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191207.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GX05, Q9LXZ2
      UniProtKB/TrEMBL
      A0A178VAL6, A0A5S9XLC7, A0A7G2EYA3
      Conserved Domains (4) summary
      pfam16711
      Location:55 → 95
      SCAB-ABD; Actin-binding domain of plant-specific actin-binding protein
      pfam16709
      Location:283 → 381
      SCAB-IgPH; Fused Ig-PH domain of plant-specific actin-binding protein
      pfam16712
      Location:100 → 269
      SCAB_CC; Coiled-coil regions of plant-specific actin-binding protein
      pfam17684
      Location:384 → 490
      SCAB-PH; PH domain of plant-specific actin-binding protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GX05.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools