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    glycine-rich protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825133, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glycine-rich protein
    Primary source
    TAIR:AT3G59640
    Locus tag
    AT3G59640
    See related
    Araport:AT3G59640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (22028649..22030505)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene diphthamide synthesis DPH2 family protein Neighboring gene mitochondrial ribosomal protein L51/S25/CI-B8 family protein Neighboring gene C2 domain-containing protein / GRAM domain-containing protein Neighboring gene elongation factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis nonhost resistance gene PSS1 confers immunity against an oomycete and a fungal pathogen but not a bacterial pathogen that cause diseases in soybean. Sumit R, et al. BMC Plant Biol, 2012 Jun 13. PMID 22694952, Free PMC Article
    2. Arabidopsis Novel Glycine-Rich Plasma Membrane PSS1 Protein Enhances Disease Resistance in Transgenic Soybean Plants. Wang B, et al. Plant Physiol, 2018 Jan. PMID 29101280, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis PSS1 is a novel nonhost resistance gene that confers a new form of nonhost resistance.[PSS1]
      Title: Arabidopsis nonhost resistance gene PSS1 confers immunity against an oomycete and a fungal pathogen but not a bacterial pathogen that cause diseases in soybean.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001084845.2
    NM_115826.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    colocalizes_with plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycine-rich protein
    NP_001078314.1
    • glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43630.1); Has 114 Blast hits to 114 proteins in 30 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 4; Plants - 60; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
    NP_191523.1
    • glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43630.1); Has 114 Blast hits to 114 proteins in 30 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 4; Plants - 60; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22028649..22030505
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084845.2 → NP_001078314.1  glycine-rich protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078314.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAG8, A0A384LIS6, A0A654FJ99, Q9M1A4

    2. NM_115826.3 → NP_191523.1  glycine-rich protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191523.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAG8, A0A384LIS6, A0A654FJ99, Q9M1A4
    Nucleotide Protein
    Heading Accession and Version

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