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    myosin-binding protein (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830544, updated on 18-Sep-2024

    Summary

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    Official Full Name
    myosin-binding protein (Protein of unknown function, DUF593)
    Primary source
    TAIR:AT5G06560
    Locus tag
    AT5G06560
    See related
    Araport:AT5G06560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15M7.9; F15M7_9
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (2003304..2006347, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene transferring glycosyl group transferase Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene FAD-linked oxidases family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of myosin XI receptors in Arabidopsis defines a distinct class of transport vesicles. Peremyslov VV, et al. Plant Cell, 2013 Aug. PMID 23995081, Free PMC Article
    2. Myosin-driven transport network in plants. Kurth EG, et al. Proc Natl Acad Sci U S A, 2017 Feb 21. PMID 28096376, Free PMC Article
    3. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120739.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin XI tail binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables myosin binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in transport vesicle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin-binding protein (Protein of unknown function, DUF593)
    NP_196274.1
    • Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT3G11850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2003304..2006347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120739.3 → NP_196274.1  myosin-binding protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196274.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FG14
      UniProtKB/TrEMBL
      A0A178UJQ7, A0A5S9Y2A4, A0A654FZ20
      Conserved Domains (1) summary
      pfam04576
      Location:72 → 162
      Zein-binding
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FG14.1

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