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    CYP71A16 cytochrome P450, family 71, subfamily A, polypeptide 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834266, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP71A16
    Official Full Name
    cytochrome P450, family 71, subfamily A, polypeptide 16
    Primary source
    TAIR:AT5G42590
    Locus tag
    AT5G42590
    See related
    Araport:AT5G42590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cytochrome P450; family 71; K16E1.6; K16E1_6; marneral oxidase; MRO; polypeptide 16; subfamily A
    Summary
    putative cytochrome P450
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    Genomic context

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    See CYP71A16 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (17031024..17033800, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene B-cell receptor-associated 31-like protein Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 12 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into the functional properties of the marneral oxidase CYP71A16 from Arabidopsis thaliana. Kranz-Finger S, et al. Biochim Biophys Acta Proteins Proteom, 2018 Jan. PMID 28734978
    2. An effective strategy for exploring unknown metabolic pathways by genome mining. Castillo DA, et al. J Am Chem Soc, 2013 Apr 17. PMID 23570231
    3. Formation of plant metabolic gene clusters within dynamic chromosomal regions. Field B, et al. Proc Natl Acad Sci U S A, 2011 Sep 20. PMID 21876149, Free PMC Article
    4. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Insights into the functional properties of the marneral oxidase CYP71A16 from Arabidopsis thaliana have been presented.
      Title: Insights into the functional properties of the marneral oxidase CYP71A16 from Arabidopsis thaliana.
    2. Data show that overexpression of CYP71A16 (At5g42590) restored the wild-type chemical profile.
      Title: Formation of plant metabolic gene clusters within dynamic chromosomal regions.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_123623.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in triterpenoid metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in endoplasmic reticulum HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 71, subfamily A, polypeptide 16
    NP_199073.1
    • ''cytochrome P450, family 71, subfamily A, polypeptide 16'' (CYP71A16); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 20 (TAIR:AT4G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17031024..17033800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123623.5 → NP_199073.1  cytochrome P450, family 71, subfamily A, polypeptide 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199073.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0V7W0, Q9FH66
      UniProtKB/TrEMBL
      A0A5S9YCM9, Q56Y26
      Conserved Domains (1) summary
      cl12078
      Location:4 → 494
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FH66.1

    Gene LinkOut

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