Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Late embryogenesis abundant protein (LEA) family protein
Primary source: TAIR:AT5G44310
Locus tag: AT5G44310
See related: Araport:AT5G44310
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: K9L2.7; K9L2_7
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 2

Sequence:: Chromosome: 5; NC_003076.8 (17847781..17849536, complement)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_123798.3

Supported by ESTs:

NM_180798.2

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: Late embryogenesis abundant protein (LEA) family protein

NP_199244.1

Late embryogenesis abundant protein (LEA) family protein; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT4G21020.1); Has 48356 Blast hits to 24924 proteins in 2440 species: Archae - 556; Bacteria - 15482; Metazoa - 11997; Fungi - 3418; Plants - 3641; Viruses - 308; Other Eukaryotes - 12954 (source: NCBI BLink).

NP_851129.1

Late embryogenesis abundant protein (LEA) family protein; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT4G21020.1); Has 48363 Blast hits to 24499 proteins in 2419 species: Archae - 560; Bacteria - 15441; Metazoa - 12035; Fungi - 3407; Plants - 3668; Viruses - 281; Other Eukaryotes - 12971 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

17847781..17849536 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_123798.3 → NP_199244.1 Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_199244.1

Status: REVIEWED

UniProtKB/TrEMBL

Q6NMC2, Q9FKV7

Conserved Domains (1) summary

pfam01442
Location:91 → 265

Apolipoprotein; Apolipoprotein A1/A4/E domain
NM_180798.2 → NP_851129.1 Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_851129.1

Status: REVIEWED

UniProtKB/TrEMBL

Q3E8H9, Q6NMC2

Conserved Domains (1) summary

pfam01442
Location:55 → 229

Apolipoprotein; Apolipoprotein A1/A4/E domain