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    Peroxidase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836533, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Peroxidase superfamily protein
    Primary source
    TAIR:AT5G64120
    Locus tag
    AT5G64120
    See related
    Araport:AT5G64120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPRX71; MHJ24.10; MHJ24_10; peroxidase 71; PRX71
    Summary
    Encodes a cell wall bound peroxidase that is induced by hypo-osmolarity and is involved in the lignification of cell walls.
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (25659257..25661007, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Peroxidase superfamily protein Neighboring gene Peroxidase superfamily protein Neighboring gene cAMP-regulated phosphoprotein 19-related protein Neighboring gene ribosomal protein S28 Neighboring gene RNA methyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis Class III Peroxidase AtPRX71 Negatively Regulates Growth under Physiological Conditions and in Response to Cell Wall Damage. Raggi S, et al. Plant Physiol, 2015 Dec. PMID 26468518, Free PMC Article
    2. Characterization of active oxygen-producing proteins in response to hypo-osmolarity in tobacco and Arabidopsis cell suspensions: identification of a cell wall peroxidase. Rouet MA, et al. J Exp Bot, 2006. PMID 16551688
    3. Simultaneously disrupting AtPrx2, AtPrx25 and AtPrx71 alters lignin content and structure in Arabidopsis stem. Shigeto J, et al. J Integr Plant Biol, 2015 Apr. PMID 25644691
    4. Catalytic profile of Arabidopsis peroxidases, AtPrx-2, 25 and 71, contributing to stem lignification. Shigeto J, et al. PLoS One, 2014. PMID 25137070, Free PMC Article
    5. Putative cationic cell-wall-bound peroxidase homologues in Arabidopsis, AtPrx2, AtPrx25, and AtPrx71, are involved in lignification. Shigeto J, et al. J Agric Food Chem, 2013 Apr 24. PMID 23551275

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Laccases and Peroxidases Co-Localize in Lignified Secondary Cell Walls throughout Stem Development.
      Title: Laccases and Peroxidases Co-Localize in Lignified Secondary Cell Walls throughout Stem Development.
    2. AtPRX71 is proposed to contributes to strengthen cell walls, therefore restricting cell expansion, during normal growth and in response to cell wall damage.
      Title: The Arabidopsis Class III Peroxidase AtPRX71 Negatively Regulates Growth under Physiological Conditions and in Response to Cell Wall Damage.
    3. Simultaneous deficiency of AtPrx2, AtPrx25 and AtPrx71 peroxidases alters lignin content and structure in Arabidopsis stem. [AtPrx71]
      Title: Simultaneously disrupting AtPrx2, AtPrx25 and AtPrx71 alters lignin content and structure in Arabidopsis stem.
    4. Assays with ferrocytochrome c as a substrate showed that AtPrx2, AtPrx25, and AtPrx71 possessed the ability to oxidize large molecules.
      Title: Catalytic profile of Arabidopsis peroxidases, AtPrx-2, 25 and 71, contributing to stem lignification.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125808.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lactoperoxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peroxidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular oxidant detoxification IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within lignin metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within respiratory burst IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in cytoplasmic stress granule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in plant-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in secretory vesicle HDA PubMed 

    General protein information

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    Preferred Names
    Peroxidase superfamily protein
    NP_201217.1
    • Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: defense response to fungus, N-terminal protein myristoylation, respiratory burst; LOCATED IN: apoplast, cell wall, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G39580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25659257..25661007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125808.3 → NP_201217.1  Peroxidase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201217.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q43387, Q9SBA0
      UniProtKB/TrEMBL
      A0A178UAR8, A0A5S9YH16
      Conserved Domains (1) summary
      cd00693
      Location:36 → 327
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q43387.1

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