U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    UDP-Glycosyltransferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836698, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    UDP-Glycosyltransferase superfamily protein
    Primary source
    TAIR:AT5G65685
    Locus tag
    AT5G65685
    See related
    Araport:AT5G65685
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    15
    Sequence:
    Chromosome: 5; NC_003076.8 (26273034..26278112, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phosphoenolpyruvate carboxykinase 2 Neighboring gene Major facilitator superfamily protein Neighboring gene ncRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. STARCH SYNTHASE5, a Noncanonical Starch Synthase-Like Protein, Promotes Starch Granule Initiation in Arabidopsis. Abt MR, et al. Plant Cell, 2020 Aug. PMID 32471861, Free PMC Article
    2. Identification, subcellular localization and biochemical characterization of water-soluble heteroglycans (SHG) in leaves of Arabidopsis thaliana L.: distinct SHG reside in the cytosol and in the apoplast. Fettke J, et al. Plant J, 2005 Aug. PMID 16098110
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_125966.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables carbohydrate binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in starch biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within starch granule initiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    UDP-Glycosyltransferase superfamily protein
    NP_001190623.1
    • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1).
    NP_569018.1
    • UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: starch synthase activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Starch synthase, catalytic domain (InterPro:IPR013534); BEST Arabidopsis thaliana protein match is: starch synthase 4 (TAIR:AT4G18240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26273034..26278112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345711.1 → NP_001329960.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    2. NM_001345709.1 → NP_001329962.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9B9, A0A5S9YHD7, Q94A19

    3. NM_001345710.1 → NP_001329958.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    4. NM_001345708.1 → NP_001329961.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    5. NM_001345707.1 → NP_001329959.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    6. NM_001345713.1 → NP_001329964.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    7. NM_001345712.1 → NP_001329963.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    8. NM_001345705.1 → NP_001329957.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9A6, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:82 → 468
      PLN02939; transferase, transferring glycosyl groups

    9. NM_001345704.1 → NP_001329965.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URY0, A0A1P8B9B0, A0A384KM79, A0A5S9YHD7, Q94A19
      Conserved Domains (1) summary
      PLN02939
      Location:22 → 351
      PLN02939; transferase, transferring glycosyl groups

    10. NM_001345706.1 → NP_001329966.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9C8, A0A654GEF0

    11. NM_001203694.1 → NP_001190623.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190623.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YHD7, F4JXI7, Q94A19
      Conserved Domains (1) summary
      cl10013
      Location:181 → 420
      Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

    12. NM_125966.4 → NP_569018.1  UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_569018.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YHD7, Q8GWC5, Q94A19
      Conserved Domains (1) summary
      cl10013
      Location:192 → 431
      Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.