uncharacterized protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: uncharacterized protein
Primary source: TAIR:AT5G66815
Locus tag: AT5G66815
See related: Araport:AT5G66815
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 1

Sequence:: Chromosome: 5; NC_003076.8 (26677365..26678002)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

C-TERMINALLY ENCODED PEPTIDE 5 (CEP5) is a novel, auxin-repressed and phloem pole-expressed signal assisting in the formation of lateral roots. In addition, there is evidence for the involvement of its proposed receptor, XYLEM INTERMIXED WITH PHLOEM 1 (XIP1)/CEP RECEPTOR 1 (CEPR1), during the process of lateral root initiation.[CEP5]
Title: CEP5 and XIP1/CEPR1 regulate lateral root initiation in Arabidopsis.

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General gene information

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NM_126080.2

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables hormone activity	IDA Inferred from Direct Assay more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in cellular response to nitrogen starvation	IEP Inferred from Expression Pattern more info	PubMed
involved_in gravitropism	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in lateral root formation	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in negative regulation of developmental vegetative growth	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in nitrate import	IDA Inferred from Direct Assay more info	PubMed
involved_in primary root development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of root development	IDA Inferred from Direct Assay more info	PubMed
involved_in regulation of root development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in response to ammonium ion	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within response to auxin	IDA Inferred from Direct Assay more info
involved_in response to auxin	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to brassinosteroid	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to gibberellin	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to nitrate starvation	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to nitrogen compound	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to osmotic stress	IEP Inferred from Expression Pattern more info	PubMed
involved_in response to salicylic acid	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within root development	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in apoplast	ISS Inferred from Sequence or Structural Similarity more info
located_in extracellular region	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: uncharacterized protein

NP_569039.1

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).