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    Nucleotide-sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832612, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleotide-sugar transporter family protein
    Primary source
    TAIR:AT5G25400
    Locus tag
    AT5G25400
    See related
    Araport:AT5G25400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18G18.140; F18G18_140
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (8823176..8824639)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cyclin a2;1 Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene transmembrane protein, putative (DUF239) Neighboring gene hypothetical protein (DUF239)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The elaborate route for UDP-arabinose delivery into the Golgi of plants. Rautengarten C, et al. Proc Natl Acad Sci U S A, 2017 Apr 18. PMID 28373556, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_122449.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables organic anion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within nucleotide-sugar transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Nucleotide-sugar transporter family protein
    NP_568469.1
    • Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT5G11230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8823176..8824639
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122449.2 → NP_568469.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568469.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3E6T0
      UniProtKB/TrEMBL
      A0A178UAN1, A0A1W6AJZ8
      Conserved Domains (1) summary
      cl26744
      Location:21 → 306
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E6T0.1

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