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    CSLD1 cellulose synthase-like D1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817872, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CSLD1
    Official Full Name
    cellulose synthase-like D1
    Primary source
    TAIR:AT2G33100
    Locus tag
    AT2G33100
    See related
    Araport:AT2G33100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLD1; cellulose synthase-like D1; CELLULOSE-SYNTHASE LIKE D1; F25I18.16; F25I18_16
    Summary
    encodes a gene similar to cellulose synthase
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    Genomic context

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    See CSLD1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (14036319..14040544, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene receptor like protein 28 Neighboring gene Transcription elongation factor (TFIIS) family protein Neighboring gene vesicle-associated membrane protein 723 Neighboring gene synaptobrevin-related protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis CSLD1 and CSLD4 are required for cellulose deposition and normal growth of pollen tubes. Wang W, et al. J Exp Bot, 2011 Oct. PMID 21765162, Free PMC Article
    2. Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells. Bernal AJ, et al. Plant Physiol, 2008 Nov. PMID 18768911, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CSLD1 and CSLD4 are required for cellulose deposition and normal growth.
      Title: Arabidopsis CSLD1 and CSLD4 are required for cellulose deposition and normal growth of pollen tubes.
    2. Mutants in CSLD1 and CSLD4 had a defect in male transmission, and plants heterozygous for insertions in CSLD1 or CSLD4 were defective in their ability to produce pollen tubes, although the number and morphology of pollen grains was normal
      Title: Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    NM_128870.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase (UDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellulose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within pollen germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cellulose synthase-like D1
    NP_180869.1
    • cellulose synthase-like D1 (CSLD1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen germination, plant-type cell wall biogenesis, polysaccharide biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3587 Blast hits to 2817 proteins in 647 species: Archae - 12; Bacteria - 1535; Metazoa - 3; Fungi - 28; Plants - 1916; Viruses - 7; Other Eukaryotes - 86 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14036319..14040544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336422.1 → NP_001324935.1  cellulose synthase-like D1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49323, Q680J9
      UniProtKB/TrEMBL
      A0A178VZJ3, A0A5S9X3Z5, W8PVL4

    2. NM_128870.4 → NP_180869.1  cellulose synthase-like D1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180869.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49323, Q680J9
      UniProtKB/TrEMBL
      A0A178VZJ3, A0A5S9X3Z5, W8PVL4
      Conserved Domains (2) summary
      PLN02248
      Location:1 → 1033
      PLN02248; cellulose synthase-like protein
      cl11394
      Location:487 → 791
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49323.1

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