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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163421.1 → NP_001156893.1 putative deoxyribonuclease TATDN3 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region that results in a frameshift, compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC138229
- Consensus CDS
-
CCDS48486.1
- UniProtKB/TrEMBL
-
D3Z0V5
- Related
- ENSMUSP00000106516.2, ENSMUST00000110891.8
- Conserved Domains (1) summary
-
- cd01310
Location:5 → 223
- TatD_DNAse; TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
-
NM_001163422.1 → NP_001156894.1 putative deoxyribonuclease TATDN3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon that results in a frameshift, compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC138229
- Consensus CDS
-
CCDS48484.1
- UniProtKB/Swiss-Prot
-
Q3U1C6
- Related
- ENSMUSP00000082773.6, ENSMUST00000085633.12
- Conserved Domains (1) summary
-
- cl00281
Location:5 → 158
- metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...
-
NM_001357166.1 → NP_001344095.1 putative deoxyribonuclease TATDN3 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC138229
- Consensus CDS
-
CCDS87944.1
- UniProtKB/Swiss-Prot
- Q3U1C6, Q6P8H6, Q9DB58
- UniProtKB/TrEMBL
-
D3YXH9
- Related
- ENSMUSP00000027945.6, ENSMUST00000027945.6
- Conserved Domains (1) summary
-
- cd01310
Location:5 → 261
- TatD_DNAse; TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
-
NM_026895.1 → NP_081171.1 putative deoxyribonuclease TATDN3 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC138229
- Consensus CDS
-
CCDS48485.1
- UniProtKB/Swiss-Prot
- Q3U1C6, Q6P8H6, Q9DB58
- UniProtKB/TrEMBL
-
E9QL22
- Related
- ENSMUSP00000106518.4, ENSMUST00000110893.10
- Conserved Domains (2) summary
-
- COG1099
Location:6 → 262
- COG1099; Predicted metal-dependent hydrolase, TIM-barrel fold [General function prediction only]
- cd01310
Location:5 → 262
- TatD_DNAse; TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000067.7 Reference GRCm39 C57BL/6J
- Range
-
190778023..190795373 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006497204.5 → XP_006497267.1 putative deoxyribonuclease TATDN3 isoform X1
- Conserved Domains (1) summary
-
- cl00281
Location:51 → 209
- metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...