U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    QWRF7 QWRF motif protein (DUF566) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828622, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    QWRF7
    Official Full Name
    QWRF motif protein (DUF566)
    Primary source
    TAIR:AT4G25190
    Locus tag
    AT4G25190
    See related
    Araport:AT4G25190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24A6.30; F24A6_30; QWRF domain containing 7
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See QWRF7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (12914183..12916156, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Uncharacterized conserved protein (UCP012943) Neighboring gene RNA polymerase III RPC4 Neighboring gene ncRNA Neighboring gene mitochondrion-localized small heat shock protein 23.6 Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001125581.2
    NM_118651.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    QWRF motif protein (DUF566)
    NP_001119053.1
    • Family of unknown function (DUF566); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_194249.2
    • Family of unknown function (DUF566); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT4G30710.1); Has 9333 Blast hits to 1824 proteins in 283 species: Archae - 0; Bacteria - 871; Metazoa - 1155; Fungi - 763; Plants - 341; Viruses - 38; Other Eukaryotes - 6165 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12914183..12916156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125581.2 → NP_001119053.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119053.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0Y0, A0A5S9XWD3
      Conserved Domains (1) summary
      pfam04484
      Location:58 → 359
      DUF566; Family of unknown function (DUF566)

    2. NM_118651.4 → NP_194249.2  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194249.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JSI4, Q1PE51, Q9SB43
      UniProtKB/TrEMBL
      A0A5S9XWD3, A0A654FSK5
      Conserved Domains (1) summary
      pfam04484
      Location:71 → 358
      QWRF; QWRF family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1PE51.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools