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    Gid4 GID complex subunit 4, VID24 homolog [ Mus musculus (house mouse) ]

    Gene ID: 66771, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gid4provided by MGI
    Official Full Name
    GID complex subunit 4, VID24 homologprovided by MGI
    Primary source
    MGI:MGI:1914021
    See related
    Ensembl:ENSMUSG00000018415 AllianceGenome:MGI:1914021
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933439F18Rik
    Summary
    Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of ubiquitin ligase complex. Orthologous to human GID4 (GID complex subunit 4 homolog). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 23.5), testis adult (RPKM 17.5) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Gid4 in Genome Data Viewer
    Location:
    11 B2; 11 37.81 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (60307971..60336103)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (60417145..60445277)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene target of myb1-like 2 (chicken) Neighboring gene STARR-positive B cell enhancer ABC_E77 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_29650 Neighboring gene dynein regulatory complex subunit 3 Neighboring gene STARR-positive B cell enhancer ABC_E1139 Neighboring gene ATP synthase mitochondrial F1 complex assembly factor 2 Neighboring gene STARR-seq mESC enhancer starr_29653 Neighboring gene STARR-seq mESC enhancer starr_29654 Neighboring gene predicted gene 12268 Neighboring gene ribosomal protein S4, X-linked pseudogene

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ubiquitin ligase complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    glucose-induced degradation protein 4 homolog
    Names
    vacuolar import and degradation protein 24 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025757.4NP_080033.3  glucose-induced degradation protein 4 homolog

      See identical proteins and their annotated locations for NP_080033.3

      Status: VALIDATED

      Source sequence(s)
      BC046821, BY716798
      Consensus CDS
      CCDS24790.1
      UniProtKB/Swiss-Prot
      Q3TP79, Q7TT31, Q99JE9, Q9CPY6
      Related
      ENSMUSP00000064926.7, ENSMUST00000070681.7
      Conserved Domains (1) summary
      pfam09783
      Location:38206
      Vac_ImportDeg; Vacuolar import and degradation protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      60307971..60336103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)