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    Wound-responsive family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828939, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Wound-responsive family protein
    Primary source
    TAIR:AT4G28240
    Locus tag
    AT4G28240
    See related
    Araport:AT4G28240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26K10.120; F26K10_120
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (13997292..13998604, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene embryo defective 1923 Neighboring gene NAD(P)H dehydrogenase B1 Neighboring gene uncharacterized protein Neighboring gene expansin B3 Neighboring gene acyl-UDP-N-acetylglucosamine O-acyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wound-induced polypeptides improve resistance against Pseudomonas syringae pv. tomato DC3000 in Arabidopsis. Yu L, et al. Biochem Biophys Res Commun, 2018 Sep 26. PMID 30172369
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118964.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    colocalizes_with plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Wound-responsive family protein
    NP_567802.1
    • Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13997292..13998604 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118964.2 → NP_567802.1  Wound-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567802.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWK2, A0A7G2F1M2, Q94A22, Q9M0I3
      Conserved Domains (1) summary
      pfam12609
      Location:9 → 85
      DUF3774; Wound-induced protein
    Nucleotide Protein
    Heading Accession and Version

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