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    Protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819551, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Protein kinase family protein
    Primary source
    TAIR:AT3G03940
    Locus tag
    AT3G03940
    See related
    Araport:AT3G03940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T11I18.5; T11I18_5
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    17
    Sequence:
    Chromosome: 3; NC_003074.8 (1013929..1019418, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein Neighboring gene ncRNA Neighboring gene kinase-like protein Neighboring gene evolutionarily conserved C-terminal region 1 Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene ARM repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana. Wang Z, et al. Proc Natl Acad Sci U S A, 2015 Jul 7. PMID 26100864, Free PMC Article
    2. EL1-like Casein Kinases Suppress ABA Signaling and Responses by Phosphorylating and Destabilizing the ABA Receptors PYR/PYLs in Arabidopsis. Chen HH, et al. Mol Plant, 2018 May 7. PMID 29505832
    3. MLK1 and MLK2 Coordinate RGA and CCA1 Activity to Regulate Hypocotyl Elongation in Arabidopsis thaliana. Zheng H, et al. Plant Cell, 2018 Jan. PMID 29255112, Free PMC Article
    4. Molecular basis for blue light-dependent phosphorylation of Arabidopsis cryptochrome 2. Liu Q, et al. Nat Commun, 2017 May 11. PMID 28492234, Free PMC Article
    5. PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis. Huang H, et al. Elife, 2016 Feb 3. PMID 26839287, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MLK1/2 and RGA directly interact with CIRCADIAN CLOCK ASSOCIATED1 (CCA1), which targets the promoter of DWARF4 (DWF4) to regulate its roles in cell expansion.[MLK2]
      Title: MLK1 and MLK2 Coordinate RGA and CCA1 Activity to Regulate Hypocotyl Elongation in Arabidopsis thaliana.
    2. Results suggest that At3g03940 and At5g18190 are involved in the phosphorylation of histone H3 at threonine 3 (H3T3) in pericentromeric/knob regions.
      Title: Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111265.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within gibberellic acid mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of abscisic acid-activated signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within protein phosphorylation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within protein phosphorylation IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of protein phosphorylation IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Protein kinase family protein
    NP_187044.1
    • Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT5G18190.1); Has 16177 Blast hits to 16113 proteins in 1419 species: Archae - 20; Bacteria - 5310; Metazoa - 4811; Fungi - 1519; Plants - 1815; Viruses - 223; Other Eukaryotes - 2479 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1013929..1019418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111265.4 → NP_187044.1  Protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187044.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDJ2, A0A384KXE3, A0A7G2EM74, Q9SQR8
      Conserved Domains (1) summary
      cd14016
      Location:140 → 414
      STKc_CK1; Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1
    Nucleotide Protein
    Heading Accession and Version

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